Primer: Fungal Endophytes
Julian Cosner, Gaurav Pandharikar, Keaton Tremble, Jake Nash, Tomás A Rush, Rytas Vilgalys, Claire Veneault-Fourrey
Current Biology https://doi.org/10.1016/j.cub.2025.08.058
Time-series RNA metabarcoding of the active Populus treumloides root microbiome reveals hidden temporal dynamics and dormant core members
Jake Nash, Keaton Tremble, Christopher Schadt, Melissa A. Cregger, Corbin Bryan, Rytas Vilgalys
A haplotype-resolved chromosomal reference genome for the porcini mushroom Boletus edulis
Etienne Brejon Lamartinière, Keaton Tremble, Bryn TM Dentinger, Kanchon K Dasmahapatra, Joseph I Hoffman
G3: Genes Genetics Genomics https://doi.org/10.1093/g3journal/jkaf069
“Runs of homozygosity reveal contrasting histories of inbreeding across global lineages of the edible porcini mushroom, Boletus edulis”
Etienne Brejon Lamartinière, Keaton Tremble , Bryn T M Dentinger, Kanchon K Dasmahapatra, Joseph I Hoffman
Molecular Ecology https://doi.org/10.1111/mec.17470
“From populations to pan-genomes: investigating the role of ecology and genomic architecture in maintaining species boundaries in the porcini mushroom, Boletus edulis”
Keaton Tremble, Etienne Brejon Lamartinière, Alexander J. Bradshaw, Roberto Flores Arzú, Joseph Hoffman, Bryn T.M. Dentinger
bioRxiv 2023.09.05.556370; doi: https://doi.org/10.1101/2023.09.05.556370
A Revised phylogeny of the Boletaceae using whole genome sequences
Keaton Tremble, Terry Henkel, Alexander Bradshaw, Colin Domnauer, Lyda Brown, Lê Xuân Thám, Guliana Furci, Cathie Aime, Jean-Marc Moncalvo, Bryn Dentinger
https://doi.org/10.1080/00275514.2024.2314963
Tremble, Keaton, J. I. Hoffman, and Bryn TM Dentinger. "Contrasting continental patterns of adaptive population divergence in the holarctic ectomycorrhizal fungus Boletus edulis." New Phytologist 237, no. 1 (2023): 295-309.
DOI: https://doi.org/10.1111/nph.18521
Tremble, K., Suz, L. M., & Dentinger, B. T. M. (2020). Lost in translation: Population genomics and long-read sequencing reveals relaxation of concerted evolution of the ribosomal DNA cistron. Molecular Phylogenetics and Evolution, 148, 106804. doi:10.1016/j.ympev.2020.106804